Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 3024345 - 3024419 | Not Available |
| protein of unknown function | SAMN06297358_2600 | Not Available | Negative | 3024694 - 3026682 | 73731.0 |
| hypothetical protein | SAMN06297358_2601 | Not Available | Positive | 3027330 - 3027710 | 14193.7 |
| hypothetical protein | SAMN06297358_2602 | Not Available | Positive | 3027715 - 3028209 | 19058.8 |
| hypothetical protein | SAMN06297358_2603 | Not Available | Positive | 3028435 - 3029070 | 24477.4 |
| zn-dependent peptidase imma, m78 family | SAMN06297358_2604 | Not Available | Positive | 3029135 - 3030202 | 41814.8 |
| hypothetical protein | SAMN06297358_2605 | Not Available | Negative | 3030260 - 3031060 | 30453.6 |
| hepn domain-containing protein | SAMN06297358_2606 | Not Available | Negative | 3031409 - 3033049 | 62082.9 |
| hypothetical protein | SAMN06297358_2607 | Not Available | Negative | 3033055 - 3033738 | 25950.8 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN06297358_2608 | Not Available | Positive | 3033864 - 3034244 | 14539.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

