Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06297358_2569 | Not Available | Positive | 2988694 - 2988909 | 8489.03 |
| hypothetical protein | SAMN06297358_2570 | Not Available | Positive | 2988935 - 2989678 | 26850.4 |
| methionine synthase (b12-dependent) | SAMN06297358_2571 | Not Available | Positive | 2990063 - 2993764 | 136507.0 |
| four helix bundle protein | SAMN06297358_2572 | Not Available | Positive | 2993820 - 2994182 | 13782.7 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN06297358_2573 | Not Available | Positive | 2994281 - 2995234 | 35721.2 |
| cytochrome c peroxidase | SAMN06297358_2574 | Not Available | Negative | 2995549 - 2996679 | 42154.5 |
| hypothetical protein | SAMN06297358_2575 | Not Available | Negative | 2996690 - 2997304 | 22220.6 |
| susd family protein | SAMN06297358_2576 | Not Available | Negative | 2997450 - 2998907 | 53888.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2577 | Not Available | Negative | 2998917 - 3002186 | 119854.0 |
| fecr family protein | SAMN06297358_2578 | Not Available | Negative | 3002186 - 3003193 | 37895.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

