Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine cyclotransferase | SAMN06297358_2558 | Not Available | Positive | 2976985 - 2978058 | 40276.1 |
| hypothetical protein | SAMN06297358_2559 | Not Available | Positive | 2978062 - 2978427 | 14222.0 |
| protein of unknown function | SAMN06297358_2560 | Not Available | Negative | 2978761 - 2979288 | 19453.2 |
| glucose-6-phosphate isomerase | SAMN06297358_2561 | Not Available | Negative | 2979466 - 2981112 | 61432.9 |
| carboxypeptidase ss1. metallo peptidase. merops family m20d | SAMN06297358_2562 | Not Available | Positive | 2981278 - 2982582 | 46759.8 |
| acetyl esterase/lipase | SAMN06297358_2564 | Not Available | Positive | 2984332 - 2985249 | 33458.2 |
| carboxyl-terminal processing protease | SAMN06297358_2565 | Not Available | Negative | 2985242 - 2986981 | 65023.5 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN06297358_2566 | Not Available | Positive | 2987015 - 2987818 | 28860.1 |
| hypothetical protein | SAMN06297358_2567 | Not Available | Positive | 2987886 - 2988452 | 23017.7 |
| protein of unknown function | SAMN06297358_2568 | Not Available | Positive | 2988471 - 2988704 | 8994.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

