Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein | SAMN06297358_0238 | Not Available | Positive | 265210 - 265800 | 21969.3 |
| hypothetical protein | SAMN06297358_0239 | Not Available | Negative | 265797 - 266291 | 18700.4 |
| hypothetical protein | SAMN06297358_0240 | Not Available | Negative | 266544 - 267251 | 26650.1 |
| na+/proline symporter | SAMN06297358_0241 | Not Available | Negative | 267267 - 268775 | 55822.1 |
| dna replication and repair protein recr | SAMN06297358_0242 | Not Available | Positive | 268985 - 269602 | 22726.6 |
| short-chain dehydrogenase | SAMN06297358_0243 | Not Available | Positive | 269606 - 270421 | 29534.2 |
| signal transduction histidine kinase | SAMN06297358_0244 | Not Available | Positive | 270421 - 272403 | 75090.0 |
| anthranilate phosphoribosyltransferase | SAMN06297358_0245 | Not Available | Positive | 272647 - 273636 | 36175.4 |
| phosphoribosylanthranilate isomerase | SAMN06297358_0246 | Not Available | Positive | 273723 - 274361 | 23995.9 |
| tryptophan synthase beta chain | SAMN06297358_0247 | Not Available | Positive | 274385 - 275566 | 42984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

