Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN06297358_2538 | Not Available | Positive | 2953362 - 2954411 | 40051.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2539 | Not Available | Positive | 2954465 - 2957887 | 124464.0 |
| starch-binding associating with outer membrane | SAMN06297358_2540 | Not Available | Positive | 2957905 - 2959503 | 58662.1 |
| hypothetical protein | SAMN06297358_2541 | Not Available | Negative | 2959583 - 2960323 | 26463.6 |
| phosphoribosylamine--glycine ligase | SAMN06297358_2542 | Not Available | Negative | 2960512 - 2961783 | 45739.6 |
| hypothetical protein | SAMN06297358_2543 | Not Available | Negative | 2961825 - 2962532 | 26649.1 |
| hypothetical protein | SAMN06297358_2544 | Not Available | Negative | 2962529 - 2962981 | 17704.0 |
| hypothetical protein | SAMN06297358_2545 | Not Available | Negative | 2963004 - 2963240 | 8512.39 |
| protocatechuate 3,4-dioxygenase beta subunit | SAMN06297358_2546 | Not Available | Negative | 2963252 - 2964007 | 26361.9 |
| two component transcriptional regulator, lyttr family | SAMN06297358_2547 | Not Available | Negative | 2964382 - 2965083 | 26902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

