Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groes | SAMN06297358_2528 | Not Available | Negative | 2942134 - 2942412 | 9761.8 |
| hypothetical protein | SAMN06297358_2529 | Not Available | Negative | 2942976 - 2943386 | 15287.7 |
| preprotein translocase subunit secg | SAMN06297358_2530 | Not Available | Negative | 2943518 - 2943880 | 11932.7 |
| hypothetical protein | SAMN06297358_2531 | Not Available | Negative | 2943895 - 2945277 | 52374.5 |
| lipopolysaccharide-assembly | SAMN06297358_2532 | Not Available | Negative | 2945402 - 2945911 | 18875.7 |
| regulatory protein, fis family | SAMN06297358_2533 | Not Available | Negative | 2945918 - 2947153 | 46309.2 |
| pp_02444 | SAMN06297358_2534 | Not Available | Negative | 2947332 - 2948864 | Not Available |
| hypothetical protein | SAMN06297358_2535 | Not Available | Positive | 2949054 - 2950760 | 63692.9 |
| hypothetical protein | SAMN06297358_2536 | Not Available | Positive | 2950850 - 2952649 | 69424.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN06297358_2537 | Not Available | Positive | 2952709 - 2953266 | 22200.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

