Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | SAMN06297358_2498 | Not Available | Negative | 2906746 - 2907447 | 26017.1 |
| carbonic anhydrase | SAMN06297358_2499 | Not Available | Negative | 2907674 - 2908309 | 23185.7 |
| sulfate permease, sulp family | SAMN06297358_2500 | Not Available | Negative | 2908314 - 2909912 | 56420.4 |
| hypothetical protein | SAMN06297358_2501 | Not Available | Negative | 2909991 - 2910329 | 12879.6 |
| hypothetical protein | SAMN06297358_2502 | Not Available | Positive | 2910503 - 2911738 | 46067.9 |
| propionyl-coa carboxylase beta chain | SAMN06297358_2503 | Not Available | Positive | 2911962 - 2913503 | 56127.0 |
| predicted arabinose efflux permease, mfs family | SAMN06297358_2504 | Not Available | Positive | 2913514 - 2914677 | 41955.8 |
| acetyltransferase (gnat) domain-containing protein | SAMN06297358_2505 | Not Available | Positive | 2914678 - 2915091 | 15876.2 |
| hypothetical protein | SAMN06297358_2506 | Not Available | Negative | 2915081 - 2915482 | 14947.6 |
| putative aminopeptidase frvx | SAMN06297358_2507 | Not Available | Positive | 2915598 - 2916716 | 41587.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

