Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein | SAMN06297358_2468 | Not Available | Negative | 2869337 - 2870779 | 52796.5 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN06297358_2469 | Not Available | Positive | 2870863 - 2871522 | 25860.1 |
| peptidase family m23 | SAMN06297358_2470 | Not Available | Positive | 2871619 - 2872545 | 34430.9 |
| hypothetical protein | SAMN06297358_2471 | Not Available | Positive | 2872563 - 2873162 | 23150.8 |
| aconitase | SAMN06297358_2472 | Not Available | Positive | 2873420 - 2876185 | 100424.0 |
| aconitase | SAMN06297358_2473 | Not Available | Positive | 2876371 - 2878653 | 81950.0 |
| transposase is200 like | SAMN06297358_2474 | Not Available | Negative | 2878822 - 2879334 | 20459.5 |
| putative signal transducing protein | SAMN06297358_2475 | Not Available | Negative | 2879503 - 2879739 | 8765.45 |
| beta-glucosidase | SAMN06297358_2476 | Not Available | Negative | 2879758 - 2881092 | 50492.9 |
| muts domain v | SAMN06297358_2477 | Not Available | Negative | 2881267 - 2883075 | 68462.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

