Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4'-phosphopantetheinyl transferase | SAMN06297358_2458 | Not Available | Positive | 2857514 - 2858215 | 27317.7 |
| aerobic c4-dicarboxylate transport protein | SAMN06297358_2459 | Not Available | Negative | 2858325 - 2859608 | 46354.6 |
| hypothetical protein | SAMN06297358_2460 | Not Available | Positive | 2859769 - 2860212 | 16911.5 |
| atp-binding cassette, subfamily b | SAMN06297358_2461 | Not Available | Negative | 2860214 - 2861992 | 67029.1 |
| trna pseudouridine38-40 synthase | SAMN06297358_2462 | Not Available | Negative | 2862076 - 2862834 | 28710.4 |
| protein of unknown function | SAMN06297358_2463 | Not Available | Positive | 2862985 - 2863431 | 16458.9 |
| atp-dependent rna helicase dead | SAMN06297358_2464 | Not Available | Positive | 2863932 - 2865878 | 71529.3 |
| hypothetical protein | SAMN06297358_2465 | Not Available | Negative | 2865998 - 2866438 | 16155.7 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN06297358_2466 | Not Available | Negative | 2866801 - 2867802 | 37375.0 |
| hlyd family secretion protein | SAMN06297358_2467 | Not Available | Negative | 2867927 - 2869276 | 47535.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

