Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0228 | Not Available | Negative | 258484 - 259080 | 23082.4 |
| atpase family associated with various cellular activities (aaa) | SAMN06297358_0229 | Not Available | Negative | 259219 - 259944 | 27617.6 |
| protein n-acetyltransferase, rimj/riml family | SAMN06297358_0230 | Not Available | Negative | 259950 - 260483 | 20453.2 |
| Trna-gly | Not Available | Not Available | Positive | 260805 - 260880 | Not Available |
| putative endonuclease | SAMN06297358_0232 | Not Available | Negative | 261050 - 261304 | 9885.88 |
| Trna-gly | Not Available | Not Available | Positive | 261393 - 261468 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 261570 - 261657 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 261702 - 261777 | Not Available |
| regulatory protein | SAMN06297358_0236 | Not Available | Negative | 261998 - 262477 | 18911.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN06297358_0237 | Not Available | Positive | 262650 - 265100 | 91231.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

