Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl-trna synthetase | SAMN06297358_2438 | Not Available | Negative | 2836087 - 2838867 | 106254.0 |
| hypothetical protein | SAMN06297358_2439 | Not Available | Positive | 2839015 - 2839158 | 5270.42 |
| cell division transport system permease protein | SAMN06297358_2440 | Not Available | Positive | 2839310 - 2840188 | 32905.0 |
| protein of unknown function | SAMN06297358_2441 | Not Available | Positive | 2840192 - 2840419 | 8433.61 |
| undecaprenyl-diphosphatase | SAMN06297358_2442 | Not Available | Positive | 2840490 - 2841284 | 29122.9 |
| trna pseudouridine55 synthase | SAMN06297358_2443 | Not Available | Positive | 2841317 - 2842057 | 27420.7 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN06297358_2444 | Not Available | Positive | 2842044 - 2842907 | 31739.6 |
| riboflavin kinase / fmn adenylyltransferase | SAMN06297358_2445 | Not Available | Positive | 2843078 - 2844022 | 35319.6 |
| hypothetical protein | SAMN06297358_2446 | Not Available | Positive | 2844110 - 2844451 | 13165.2 |
| transporter, cpa2 family | SAMN06297358_2447 | Not Available | Positive | 2844510 - 2846735 | 82051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

