Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction endonuclease ruvc | SAMN06297358_2428 | Not Available | Positive | 2823484 - 2824050 | 20821.7 |
| two component transcriptional regulator, lyttr family | SAMN06297358_2429 | Not Available | Negative | 2824053 - 2824826 | 29489.5 |
| hypothetical protein | SAMN06297358_2430 | Not Available | Negative | 2824837 - 2825853 | 38654.1 |
| hypothetical protein | SAMN06297358_2431 | Not Available | Negative | 2825909 - 2826643 | 27566.8 |
| tellurite resistance protein terc | SAMN06297358_2432 | Not Available | Negative | 2826796 - 2827848 | 39902.4 |
| octaprenyl-diphosphate synthase | SAMN06297358_2433 | Not Available | Negative | 2827848 - 2828819 | 36334.0 |
| esterase/lipase | SAMN06297358_2434 | Not Available | Positive | 2828940 - 2829923 | 36593.3 |
| dgtpase | SAMN06297358_2435 | Not Available | Positive | 2830099 - 2831448 | 50860.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN06297358_2436 | Not Available | Negative | 2831685 - 2834108 | 88067.0 |
| hypothetical protein | SAMN06297358_2437 | Not Available | Positive | 2834325 - 2835911 | 59943.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

