Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photo-lyase | SAMN06297358_2418 | Not Available | Negative | 2814830 - 2816128 | 49041.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06297358_2419 | Not Available | Positive | 2816263 - 2816841 | 22921.9 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN06297358_2420 | Not Available | Positive | 2816993 - 2817433 | 16475.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN06297358_2421 | Not Available | Negative | 2817489 - 2818652 | 45007.8 |
| rnase hii | SAMN06297358_2422 | Not Available | Negative | 2818687 - 2819313 | 23367.1 |
| peptide/nickel transport system permease protein | SAMN06297358_2423 | Not Available | Negative | 2819640 - 2820785 | 42030.2 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN06297358_2424 | Not Available | Negative | 2820787 - 2821917 | 42480.1 |
| hypothetical protein | SAMN06297358_2425 | Not Available | Negative | 2821895 - 2822872 | 37513.3 |
| toxin yoeb | SAMN06297358_2426 | Not Available | Negative | 2822875 - 2823147 | 10813.1 |
| hypothetical protein | SAMN06297358_2427 | Not Available | Negative | 2823144 - 2823404 | 9878.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

