Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2408 | Not Available | Positive | 2801600 - 2802253 | 25466.4 |
| hypothetical protein | SAMN06297358_2409 | Not Available | Positive | 2802385 - 2802558 | 6371.89 |
| hypothetical protein | SAMN06297358_2410 | Not Available | Positive | 2802747 - 2804624 | 71309.4 |
| peptidase family m1 | SAMN06297358_2411 | Not Available | Positive | 2804695 - 2806350 | 62679.1 |
| transglutaminase-like superfamily protein | SAMN06297358_2412 | Not Available | Positive | 2806438 - 2807571 | 43842.0 |
| putative auto-transporter adhesin, head gin domain | SAMN06297358_2413 | Not Available | Positive | 2807684 - 2808436 | 25899.1 |
| hypothetical protein | SAMN06297358_2414 | Not Available | Negative | 2808508 - 2809398 | 34071.5 |
| protein of unknown function | SAMN06297358_2415 | Not Available | Negative | 2809528 - 2810247 | 27914.3 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN06297358_2416 | Not Available | Negative | 2810586 - 2811812 | 43357.3 |
| 2-oxoglutarate dehydrogenase e1 component | SAMN06297358_2417 | Not Available | Negative | 2811913 - 2814714 | 104921.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

