Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN06297358_2398 | Not Available | Positive | 2789657 - 2790724 | 38492.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN06297358_2399 | Not Available | Positive | 2790815 - 2793985 | 115040.0 |
| hypothetical protein | SAMN06297358_2400 | Not Available | Positive | 2794375 - 2794569 | 7192.96 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_2401 | Not Available | Positive | 2794759 - 2795241 | 18668.3 |
| hypothetical protein | SAMN06297358_2402 | Not Available | Positive | 2795228 - 2795782 | 21165.4 |
| fucose permease | SAMN06297358_2403 | Not Available | Negative | 2796037 - 2797221 | 42534.6 |
| cubico group peptidase, beta-lactamase class c family | SAMN06297358_2404 | Not Available | Negative | 2797352 - 2798533 | 44949.6 |
| dihydrolipoamide dehydrogenase | SAMN06297358_2405 | Not Available | Negative | 2798791 - 2800197 | 49654.2 |
| acyl carrier protein | SAMN06297358_2406 | Not Available | Positive | 2800811 - 2801314 | 18239.4 |
| hypothetical protein | SAMN06297358_2407 | Not Available | Positive | 2801262 - 2801573 | 10733.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

