Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endonuclease | SAMN06297358_2388 | Not Available | Negative | 2782558 - 2782860 | 11866.5 |
| Trna-asn | Not Available | Not Available | Positive | 2783135 - 2783208 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 2783340 - 2783416 | Not Available |
| sugar or nucleoside kinase, ribokinase family | SAMN06297358_2391 | Not Available | Positive | 2783563 - 2784483 | 34071.2 |
| predicted heme/steroid binding protein | SAMN06297358_2392 | Not Available | Negative | 2784593 - 2784829 | 9077.71 |
| hypothetical protein | SAMN06297358_2393 | Not Available | Negative | 2784829 - 2785506 | 25899.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_2394 | Not Available | Negative | 2785714 - 2786229 | 19938.8 |
| udp-n-acetylmuramate dehydrogenase | SAMN06297358_2395 | Not Available | Negative | 2786378 - 2787391 | 36455.7 |
| transcriptional regulator, tetr family | SAMN06297358_2396 | Not Available | Positive | 2787600 - 2788238 | 25061.1 |
| outer membrane protein tolc | SAMN06297358_2397 | Not Available | Positive | 2788277 - 2789617 | 49607.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

