Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN06297358_2378 | Not Available | Negative | 2771624 - 2772649 | 38472.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_2379 | Not Available | Negative | 2772695 - 2773315 | 23641.8 |
| hypothetical protein | SAMN06297358_2380 | Not Available | Positive | 2773520 - 2774131 | 23044.6 |
| hypothetical protein | SAMN06297358_2381 | Not Available | Positive | 2774154 - 2775125 | 37237.7 |
| 3-phytase | SAMN06297358_2382 | Not Available | Negative | 2775231 - 2776304 | 39035.1 |
| soluble nsf attachment protein, snap | SAMN06297358_2383 | Not Available | Negative | 2776420 - 2778054 | 62957.2 |
| tonb-dependent receptor | SAMN06297358_2384 | Not Available | Negative | 2778342 - 2781164 | 104992.0 |
| hypothetical protein | SAMN06297358_2385 | Not Available | Positive | 2781218 - 2781388 | 6712.89 |
| hypothetical protein | SAMN06297358_2386 | Not Available | Positive | 2781457 - 2781654 | 7159.72 |
| protein of unknown function | SAMN06297358_2387 | Not Available | Negative | 2781986 - 2782429 | 16968.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

