Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance transporter, emrb/qaca subfamily | SAMN06297358_2368 | Not Available | Negative | 2757791 - 2759194 | 51731.1 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN06297358_2369 | Not Available | Negative | 2759287 - 2760603 | 48154.4 |
| helix-turn-helix domain-containing protein | SAMN06297358_2370 | Not Available | Positive | 2760818 - 2761711 | 34746.3 |
| quinol monooxygenase ygin | SAMN06297358_2371 | Not Available | Positive | 2761724 - 2762125 | 15621.0 |
| uncharacterized zinc-type alcohol dehydrogenase-like protein | SAMN06297358_2372 | Not Available | Positive | 2762148 - 2763209 | 37567.3 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN06297358_2373 | Not Available | Positive | 2763553 - 2764146 | 21422.1 |
| xanthine dehydrogenase yags fad-binding subunit | SAMN06297358_2374 | Not Available | Positive | 2764143 - 2765120 | 34880.0 |
| xanthine dehydrogenase yagr molybdenum-binding subunit | SAMN06297358_2375 | Not Available | Positive | 2765131 - 2767350 | 78939.5 |
| hypothetical chaperone protein | SAMN06297358_2376 | Not Available | Negative | 2767546 - 2768814 | 47852.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN06297358_2377 | Not Available | Negative | 2768931 - 2771621 | 100029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

