Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy 2-butanone 4-phosphate synthase / gtp cyclohydrolase ii | SAMN06297358_2358 | Not Available | Negative | 2747848 - 2749173 | 48760.3 |
| lipopolysaccharide export system permease protein | SAMN06297358_2359 | Not Available | Negative | 2749598 - 2751070 | 55269.4 |
| hypothetical protein | SAMN06297358_2360 | Not Available | Negative | 2751197 - 2751577 | 14923.6 |
| Trna-met | Not Available | Not Available | Positive | 2751826 - 2751899 | Not Available |
| peptidase family s41 | SAMN06297358_2362 | Not Available | Negative | 2752005 - 2753411 | 52765.5 |
| arac-type dna-binding protein | SAMN06297358_2363 | Not Available | Negative | 2753478 - 2754278 | 31309.6 |
| hypothetical protein | SAMN06297358_2364 | Not Available | Negative | 2754306 - 2754659 | 13741.5 |
| hypothetical protein | SAMN06297358_2365 | Not Available | Negative | 2754725 - 2755180 | 16717.3 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN06297358_2366 | Not Available | Negative | 2755467 - 2756087 | 24294.0 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN06297358_2367 | Not Available | Negative | 2756168 - 2757718 | 57691.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

