Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | SAMN06297358_2348 | Not Available | Positive | 2735241 - 2737685 | 90816.6 |
| hypothetical protein | SAMN06297358_2349 | Not Available | Positive | 2737741 - 2738049 | 11516.9 |
| uncharacterized conserved protein, contains hepn domain | SAMN06297358_2350 | Not Available | Positive | 2738036 - 2738380 | 13150.8 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN06297358_2351 | Not Available | Negative | 2738381 - 2739112 | 28346.8 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN06297358_2352 | Not Available | Positive | 2739421 - 2740080 | 25021.3 |
| recombination protein reca | SAMN06297358_2353 | Not Available | Positive | 2740215 - 2741225 | 36360.0 |
| start domain-containing protein | SAMN06297358_2354 | Not Available | Negative | 2741367 - 2742014 | 24017.2 |
| hypothetical protein | SAMN06297358_2355 | Not Available | Negative | 2742022 - 2742240 | 8017.2 |
| n6-l-threonylcarbamoyladenine synthase | SAMN06297358_2356 | Not Available | Negative | 2742252 - 2743253 | 36206.7 |
| family of unknown function | SAMN06297358_2357 | Not Available | Positive | 2743328 - 2747728 | 163453.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

