Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_0218 | Not Available | Negative | 245700 - 246665 | 34592.1 |
| starch-binding associating with outer membrane | SAMN06297358_0219 | Not Available | Negative | 246714 - 248174 | 54274.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_0220 | Not Available | Negative | 248176 - 251235 | 110914.0 |
| protein of unknown function | SAMN06297358_0221 | Not Available | Negative | 251691 - 253439 | 66364.4 |
| carbohydrate-binding family 9 | SAMN06297358_0222 | Not Available | Negative | 253569 - 254213 | 25181.9 |
| phosphotransferase enzyme family protein | SAMN06297358_0223 | Not Available | Negative | 254220 - 255350 | 43408.4 |
| transcriptional regulator, laci family | SAMN06297358_0224 | Not Available | Positive | 255546 - 256643 | 42070.5 |
| immunity protein 19 | SAMN06297358_0225 | Not Available | Negative | 256667 - 257320 | 25833.9 |
| hypothetical protein | SAMN06297358_0226 | Not Available | Negative | 257325 - 257816 | 18929.7 |
| suppressor of fused protein (sufu) | SAMN06297358_0227 | Not Available | Negative | 257824 - 258468 | 24805.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

