Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 2707592 - 2707664 | Not Available |
| mannose-6-phosphate isomerase, cupin superfamily | SAMN06297358_2327 | Not Available | Negative | 2707840 - 2708337 | 19191.6 |
| acetyl esterase/lipase | SAMN06297358_2328 | Not Available | Negative | 2708408 - 2709262 | 32170.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_2329 | Not Available | Negative | 2709524 - 2711398 | 68387.5 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN06297358_2330 | Not Available | Negative | 2711435 - 2713258 | 69675.8 |
| predicted alpha-1,6-mannanase, gh76 family | SAMN06297358_2331 | Not Available | Negative | 2713494 - 2714663 | 45109.1 |
| suse outer membrane protein | SAMN06297358_2332 | Not Available | Negative | 2714729 - 2715877 | 42066.8 |
| starch-binding associating with outer membrane | SAMN06297358_2333 | Not Available | Negative | 2715918 - 2717534 | 60275.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2334 | Not Available | Negative | 2717562 - 2720768 | 118817.0 |
| mfs transporter, fhs family, l-fucose permease | SAMN06297358_2335 | Not Available | Negative | 2720943 - 2722175 | 44921.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

