Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2316 | Not Available | Positive | 2692848 - 2693600 | 28323.1 |
| hypothetical protein | SAMN06297358_2317 | Not Available | Positive | 2693643 - 2693966 | 12054.6 |
| protein of unknown function | SAMN06297358_2318 | Not Available | Negative | 2694110 - 2694844 | 27823.8 |
| short-chain dehydrogenase | SAMN06297358_2319 | Not Available | Positive | 2695478 - 2696320 | 30419.5 |
| arac-like ligand binding domain-containing protein | SAMN06297358_2320 | Not Available | Positive | 2696684 - 2697583 | 35010.8 |
| protein of unknown function | SAMN06297358_2321 | Not Available | Negative | 2697867 - 2700398 | 95714.4 |
| susd family protein | SAMN06297358_2322 | Not Available | Negative | 2700406 - 2701758 | 50538.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2323 | Not Available | Negative | 2701769 - 2705401 | 133574.0 |
| fecr family protein | SAMN06297358_2324 | Not Available | Negative | 2705529 - 2706659 | 41883.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_2325 | Not Available | Negative | 2706806 - 2707402 | 23250.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

