Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | SAMN06297358_2306 | Not Available | Negative | 2677717 - 2678706 | 38669.0 |
| alkaline phosphatase | SAMN06297358_2307 | Not Available | Positive | 2678796 - 2680202 | 51438.1 |
| hypothetical protein | SAMN06297358_2308 | Not Available | Negative | 2680319 - 2681524 | 44466.5 |
| hypothetical protein | SAMN06297358_2309 | Not Available | Negative | 2681537 - 2682751 | 44589.0 |
| hypothetical protein | SAMN06297358_2310 | Not Available | Negative | 2682783 - 2684066 | 47422.5 |
| hypothetical protein | SAMN06297358_2311 | Not Available | Negative | 2684075 - 2685220 | 42800.4 |
| outer membrane cobalamin receptor protein | SAMN06297358_2312 | Not Available | Negative | 2685217 - 2687265 | 77970.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_2313 | Not Available | Positive | 2687686 - 2688327 | 25320.4 |
| fecr family protein | SAMN06297358_2314 | Not Available | Positive | 2688385 - 2689341 | 36697.6 |
| tonb-dependent receptor | SAMN06297358_2315 | Not Available | Positive | 2689495 - 2692836 | 125933.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

