Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2296 | Not Available | Positive | 2669025 - 2669438 | 15454.2 |
| hypothetical protein | SAMN06297358_2297 | Not Available | Positive | 2669571 - 2670011 | 16883.7 |
| putative endonuclease | SAMN06297358_2298 | Not Available | Positive | 2670295 - 2670633 | 13567.5 |
| isocitrate dehydrogenase | SAMN06297358_2299 | Not Available | Negative | 2671062 - 2673281 | 79572.6 |
| hypothetical protein | SAMN06297358_2300 | Not Available | Positive | 2673603 - 2673737 | 5173.57 |
| methionine aminopeptidase, type i | SAMN06297358_2301 | Not Available | Positive | 2673804 - 2674568 | 27897.3 |
| s-formylglutathione hydrolase frmb | SAMN06297358_2302 | Not Available | Negative | 2674822 - 2675628 | 29903.9 |
| predicted atpase | SAMN06297358_2303 | Not Available | Negative | 2675861 - 2676424 | 21724.2 |
| hypothetical protein | SAMN06297358_2304 | Not Available | Negative | 2676795 - 2677046 | 9168.45 |
| hypothetical protein | SAMN06297358_2305 | Not Available | Negative | 2677092 - 2677733 | 24579.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

