Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding beta-propeller fold protein ynce | SAMN06297358_2286 | Not Available | Positive | 2654954 - 2656465 | 52322.8 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN06297358_2287 | Not Available | Positive | 2656651 - 2658177 | 55633.3 |
| rod shape-determining protein mreb | SAMN06297358_2288 | Not Available | Positive | 2658379 - 2659401 | 36805.0 |
| rod shape-determining protein mrec | SAMN06297358_2289 | Not Available | Positive | 2659475 - 2660311 | 31219.8 |
| rod shape-determining protein mred | SAMN06297358_2290 | Not Available | Positive | 2660301 - 2660816 | 19724.8 |
| penicillin-binding protein 2 | SAMN06297358_2291 | Not Available | Positive | 2660816 - 2662792 | 73840.9 |
| rod shape determining protein roda | SAMN06297358_2292 | Not Available | Positive | 2662776 - 2664038 | 46897.9 |
| hypothetical protein | SAMN06297358_2293 | Not Available | Negative | 2664128 - 2665228 | 41975.5 |
| thymidine kinase | SAMN06297358_2294 | Not Available | Positive | 2665326 - 2665964 | 23581.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_2295 | Not Available | Negative | 2666044 - 2668881 | 101505.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

