Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase beta subunit | SAMN06297358_2276 | Not Available | Negative | 2641710 - 2644106 | 87703.0 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN06297358_2277 | Not Available | Negative | 2644325 - 2645158 | 31632.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_2278 | Not Available | Positive | 2645434 - 2646036 | 23233.1 |
| fecr family protein | SAMN06297358_2279 | Not Available | Positive | 2646116 - 2647288 | 43687.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2280 | Not Available | Positive | 2647463 - 2650915 | 125762.0 |
| starch-binding associating with outer membrane | SAMN06297358_2281 | Not Available | Positive | 2650935 - 2652593 | 60600.4 |
| dna replication and repair protein radc | SAMN06297358_2282 | Not Available | Negative | 2652653 - 2653351 | 25346.8 |
| ssu ribosomal protein s20p | SAMN06297358_2283 | Not Available | Negative | 2653427 - 2653681 | 9684.15 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN06297358_2284 | Not Available | Positive | 2653894 - 2654493 | 22937.7 |
| hypothetical protein | SAMN06297358_2285 | Not Available | Positive | 2654594 - 2654905 | 11989.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

