Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine phosphoribosyltransferase | SAMN06297358_2266 | Not Available | Negative | 2629014 - 2629541 | 18949.1 |
| competence protein comea helix-hairpin-helix repeat region | SAMN06297358_2267 | Not Available | Negative | 2629681 - 2630580 | 35050.7 |
| putative hemolysin | SAMN06297358_2268 | Not Available | Positive | 2630735 - 2632486 | 66698.8 |
| hypothetical protein | SAMN06297358_2269 | Not Available | Positive | 2632791 - 2634008 | 47778.6 |
| hypothetical protein | SAMN06297358_2270 | Not Available | Negative | 2634046 - 2635410 | 48098.1 |
| tonb-dependent receptor | SAMN06297358_2271 | Not Available | Negative | 2635534 - 2638335 | 102666.0 |
| uncharacterized membrane protein ygl010w | SAMN06297358_2272 | Not Available | Negative | 2638470 - 2638982 | 19502.6 |
| ribonucrease y | SAMN06297358_2273 | Not Available | Negative | 2639145 - 2640707 | 58160.3 |
| cell division protein zapa | SAMN06297358_2274 | Not Available | Negative | 2641003 - 2641293 | 11048.3 |
| hypothetical protein | SAMN06297358_2275 | Not Available | Negative | 2641326 - 2641616 | 10872.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

