Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | SAMN06297358_2256 | Not Available | Negative | 2622516 - 2623703 | 42975.9 |
| Trna-thr | Not Available | Not Available | Positive | 2623829 - 2623900 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2623983 - 2624058 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2624133 - 2624218 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2624256 - 2624328 | Not Available |
| putative sigma-54 modulation protein | SAMN06297358_2261 | Not Available | Negative | 2624573 - 2624920 | 13259.9 |
| integrase/recombinase xerc | SAMN06297358_2262 | Not Available | Negative | 2624934 - 2625821 | 33835.9 |
| small subunit ribosomal protein s21 | SAMN06297358_2263 | Not Available | Negative | 2626077 - 2626271 | 7501.29 |
| hypothetical protein | SAMN06297358_2264 | Not Available | Negative | 2626450 - 2627361 | 32468.9 |
| acyl-coa dehydrogenase | SAMN06297358_2265 | Not Available | Negative | 2627570 - 2628724 | 41748.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

