Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN06297358_2246 | Not Available | Negative | 2610581 - 2610892 | 11606.0 |
| dna-directed rna polymerase subunit beta' | SAMN06297358_2247 | Not Available | Negative | 2610981 - 2615267 | 159716.0 |
| dna-directed rna polymerase subunit beta | SAMN06297358_2248 | Not Available | Negative | 2615343 - 2619146 | 142279.0 |
| large subunit ribosomal protein l7/l12 | SAMN06297358_2249 | Not Available | Negative | 2619300 - 2619677 | 12866.5 |
| large subunit ribosomal protein l10 | SAMN06297358_2250 | Not Available | Negative | 2619742 - 2620266 | 18821.9 |
| large subunit ribosomal protein l1 | SAMN06297358_2251 | Not Available | Negative | 2620269 - 2620967 | 24529.0 |
| lsu ribosomal protein l11p | SAMN06297358_2252 | Not Available | Negative | 2620994 - 2621434 | 15422.8 |
| transcription antitermination protein nusg | SAMN06297358_2253 | Not Available | Negative | 2621580 - 2622122 | 20501.0 |
| preprotein translocase subunit sece | SAMN06297358_2254 | Not Available | Negative | 2622137 - 2622328 | 7083.67 |
| Trna-trp | Not Available | Not Available | Positive | 2622381 - 2622454 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

