Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein, yaio family | SAMN06297358_0208 | Not Available | Negative | 231883 - 233166 | 49250.9 |
| regulatory protein, luxr family | SAMN06297358_0209 | Not Available | Positive | 233395 - 234066 | 25237.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN06297358_0210 | Not Available | Negative | 234063 - 235190 | 42173.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN06297358_0211 | Not Available | Negative | 235206 - 235796 | 23164.2 |
| putative intracellular protease/amidase | SAMN06297358_0212 | Not Available | Negative | 235974 - 236729 | 27742.1 |
| modulator of drug activity b | SAMN06297358_0213 | Not Available | Negative | 236726 - 237457 | 28375.1 |
| error-prone dna polymerase | SAMN06297358_0214 | Not Available | Negative | 237556 - 240768 | 121143.0 |
| protein imub | SAMN06297358_0215 | Not Available | Negative | 241111 - 242604 | 57261.9 |
| protein imua | SAMN06297358_0216 | Not Available | Negative | 242601 - 243335 | 27628.5 |
| protein of unknown function | SAMN06297358_0217 | Not Available | Negative | 243970 - 245691 | 64985.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

