Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN06297358_2235 | Not Available | Negative | 2599299 - 2601425 | 80002.4 |
| topoisomerase-4 subunit b | SAMN06297358_2236 | Not Available | Negative | 2601566 - 2603440 | 71447.0 |
| basic amino acid/polyamine antiporter, apa family | SAMN06297358_2237 | Not Available | Positive | 2603798 - 2605147 | 49314.5 |
| cystathionine gamma-synthase | SAMN06297358_2238 | Not Available | Positive | 2605200 - 2606366 | 43091.2 |
| hypothetical protein | SAMN06297358_2239 | Not Available | Positive | 2606366 - 2606911 | 20933.5 |
| hypothetical protein | SAMN06297358_2241 | Not Available | Negative | 2607023 - 2607175 | 5850.36 |
| atp-dependent rna helicase rhle | SAMN06297358_2242 | Not Available | Positive | 2607216 - 2608466 | 46429.8 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN06297358_2243 | Not Available | Negative | 2608501 - 2609229 | 29417.8 |
| mannose-6-phosphate isomerase, type 2 | SAMN06297358_2244 | Not Available | Negative | 2609307 - 2609804 | 19042.2 |
| hypothetical protein | SAMN06297358_2245 | Not Available | Negative | 2609866 - 2610516 | 25160.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

