Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2225 | Not Available | Negative | 2583455 - 2584045 | 22633.9 |
| hypothetical protein | SAMN06297358_2226 | Not Available | Positive | 2584141 - 2584749 | 22478.0 |
| xtp/ditp diphosphohydrolase | SAMN06297358_2227 | Not Available | Positive | 2584840 - 2585415 | 21391.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN06297358_2228 | Not Available | Negative | 2585511 - 2587328 | 67534.9 |
| hypothetical protein | SAMN06297358_2229 | Not Available | Negative | 2587315 - 2588952 | 61500.5 |
| glycerophosphoryl diester phosphodiesterase | SAMN06297358_2230 | Not Available | Positive | 2589313 - 2590194 | 33120.4 |
| cytidine deaminase | SAMN06297358_2231 | Not Available | Negative | 2590187 - 2590681 | 18014.8 |
| family of unknown function | SAMN06297358_2232 | Not Available | Positive | 2590837 - 2595828 | 184039.0 |
| outer membrane protein assembly factor bama | SAMN06297358_2233 | Not Available | Positive | 2595791 - 2598112 | 87921.1 |
| membrane protein | SAMN06297358_2234 | Not Available | Positive | 2598242 - 2599240 | 36227.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

