Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyketide cyclase / dehydrase and lipid transport | SAMN06297358_2203 | Not Available | Positive | 2558028 - 2558582 | 20755.4 |
| two component transcriptional regulator, winged helix family | SAMN06297358_2204 | Not Available | Positive | 2558721 - 2559398 | 25065.7 |
| signal transduction histidine kinase | SAMN06297358_2205 | Not Available | Positive | 2559398 - 2560771 | 51423.0 |
| hypothetical protein | SAMN06297358_2206 | Not Available | Positive | 2560901 - 2561401 | 19092.9 |
| putative membrane protein | SAMN06297358_2207 | Not Available | Positive | 2561434 - 2562360 | 35566.7 |
| dna gyrase subunit b | SAMN06297358_2208 | Not Available | Negative | 2562679 - 2564637 | 72312.0 |
| periplasmic chaperone for outer membrane proteins skp | SAMN06297358_2209 | Not Available | Positive | 2564872 - 2565474 | 22141.3 |
| ecsc protein family protein | SAMN06297358_2210 | Not Available | Positive | 2565724 - 2566461 | 27703.2 |
| atpase components of abc transporters with duplicated atpase domains | SAMN06297358_2212 | Not Available | Positive | 2566760 - 2568385 | 61483.2 |
| tonb-dependent receptor plug domain | SAMN06297358_2213 | Not Available | Negative | 2568557 - 2571460 | 106344.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

