Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerol transferase mdob | SAMN06297358_2182 | Not Available | Positive | 2539945 - 2541870 | 73457.4 |
| gtra-like protein | SAMN06297358_2183 | Not Available | Positive | 2541874 - 2542353 | 18454.0 |
| phenylalanine-4-hydroxylase | SAMN06297358_2184 | Not Available | Positive | 2542795 - 2544579 | 66779.5 |
| phosphonoacetate hydrolase | SAMN06297358_2185 | Not Available | Negative | 2544768 - 2545346 | 21383.4 |
| short-chain dehydrogenase | SAMN06297358_2186 | Not Available | Positive | 2545456 - 2546157 | 25008.6 |
| hypothetical protein | SAMN06297358_2187 | Not Available | Positive | 2546253 - 2546621 | 13455.9 |
| cell wall-associated hydrolase, nlpc family | SAMN06297358_2188 | Not Available | Positive | 2546772 - 2547308 | 19550.8 |
| nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) family | SAMN06297358_2189 | Not Available | Negative | 2547446 - 2548333 | 32695.2 |
| fumarylacetoacetate hydrolase | SAMN06297358_2191 | Not Available | Negative | 2548625 - 2549620 | 36947.1 |
| homogentisate 1,2-dioxygenase | SAMN06297358_2192 | Not Available | Positive | 2550101 - 2551267 | 44741.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

