Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN06297358_2171 | Not Available | Negative | 2529864 - 2530484 | 21496.7 |
| hypothetical protein | SAMN06297358_2172 | Not Available | Negative | 2530721 - 2531263 | 19441.3 |
| abc-2 type transport system atp-binding protein | SAMN06297358_2173 | Not Available | Negative | 2531265 - 2531972 | 25906.8 |
| glycerophosphoryl diester phosphodiesterase | SAMN06297358_2174 | Not Available | Negative | 2531974 - 2532969 | 37069.3 |
| patatin-like phospholipase/acyl hydrolase | SAMN06297358_2175 | Not Available | Negative | 2532999 - 2534048 | 39257.1 |
| glycyl-trna synthetase | SAMN06297358_2177 | Not Available | Positive | 2534584 - 2536071 | 57656.6 |
| hypothetical protein | SAMN06297358_2178 | Not Available | Positive | 2536217 - 2537059 | 30101.5 |
| arsenate reductase | SAMN06297358_2179 | Not Available | Negative | 2537120 - 2537467 | 12991.8 |
| nlpc/p60 family protein | SAMN06297358_2180 | Not Available | Negative | 2537467 - 2538669 | 44182.1 |
| ca2+:h+ antiporter | SAMN06297358_2181 | Not Available | Positive | 2538829 - 2539914 | 37645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

