Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2161 | Not Available | Positive | 2519460 - 2520053 | 21455.4 |
| transcriptional regulator, deor family | SAMN06297358_2162 | Not Available | Positive | 2520152 - 2520916 | 27967.1 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN06297358_2163 | Not Available | Negative | 2520998 - 2522368 | 50405.0 |
| zinc dependent phospholipase c | SAMN06297358_2164 | Not Available | Positive | 2522561 - 2523517 | 36891.3 |
| membrane-associated protein | SAMN06297358_2165 | Not Available | Negative | 2523835 - 2524518 | 25645.9 |
| dna polymerase-3 subunit beta | SAMN06297358_2166 | Not Available | Negative | 2524702 - 2525826 | 41390.3 |
| abc-2 type transport system permease protein | SAMN06297358_2167 | Not Available | Negative | 2525860 - 2527566 | 64165.6 |
| abc-2 type transport system permease protein | SAMN06297358_2168 | Not Available | Negative | 2527560 - 2528288 | 27198.7 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06297358_2169 | Not Available | Negative | 2528382 - 2529002 | 21592.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN06297358_2170 | Not Available | Negative | 2529119 - 2529652 | 18353.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

