Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | SAMN06297358_2150 | Not Available | Negative | 2505392 - 2507377 | 76219.2 |
| alpha-glucosidase | SAMN06297358_2151 | Not Available | Negative | 2507590 - 2510061 | 95771.7 |
| putative abc transport system atp-binding protein | SAMN06297358_2153 | Not Available | Positive | 2510926 - 2511555 | 23077.7 |
| putative abc transport system permease protein | SAMN06297358_2154 | Not Available | Positive | 2511552 - 2512775 | 44552.2 |
| hypothetical protein | SAMN06297358_2155 | Not Available | Positive | 2512860 - 2513312 | 16799.8 |
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | SAMN06297358_2156 | Not Available | Negative | 2513602 - 2514111 | 18070.2 |
| hypothetical protein | SAMN06297358_2157 | Not Available | Negative | 2514282 - 2514863 | 22163.2 |
| hypothetical protein | SAMN06297358_2158 | Not Available | Negative | 2514920 - 2516929 | 77094.3 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN06297358_2159 | Not Available | Positive | 2517046 - 2518020 | 38144.7 |
| o-succinylbenzoate synthase | SAMN06297358_2160 | Not Available | Positive | 2518024 - 2519121 | 40328.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

