Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN06297358_2140 | Not Available | Positive | 2492646 - 2493032 | 13703.2 |
| adenylate cyclase | SAMN06297358_2141 | Not Available | Negative | 2493146 - 2493613 | 17764.9 |
| protein of unknown function | SAMN06297358_2142 | Not Available | Positive | 2493887 - 2494564 | 23820.9 |
| hypothetical protein | SAMN06297358_2143 | Not Available | Negative | 2494605 - 2496968 | 90269.0 |
| hypothetical protein | SAMN06297358_2144 | Not Available | Negative | 2497257 - 2498015 | 28833.2 |
| rna polymerase sigma factor, sigma-70 family | SAMN06297358_2145 | Not Available | Negative | 2498008 - 2498571 | 21471.9 |
| hypothetical protein | SAMN06297358_2146 | Not Available | Positive | 2498910 - 2499893 | 35442.1 |
| hypothetical protein | SAMN06297358_2147 | Not Available | Positive | 2500010 - 2502076 | 78298.2 |
| chat domain-containing protein | SAMN06297358_2148 | Not Available | Positive | 2502398 - 2505058 | 100872.0 |
| hypothetical protein | SAMN06297358_2149 | Not Available | Negative | 2505045 - 2505392 | 13628.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

