Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN06297358_2130 | Not Available | Positive | 2481783 - 2482505 | 27994.8 |
| hypothetical protein | SAMN06297358_2131 | Not Available | Positive | 2482535 - 2484241 | 64737.3 |
| head domain of trimeric autotransporter adhesin | SAMN06297358_2132 | Not Available | Positive | 2484499 - 2485671 | 41180.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN06297358_2133 | Not Available | Positive | 2485677 - 2486672 | 36963.3 |
| predicted purr-regulated permease perm | SAMN06297358_2134 | Not Available | Positive | 2487316 - 2488434 | 41212.1 |
| hypothetical protein | SAMN06297358_2135 | Not Available | Positive | 2488477 - 2489016 | 19588.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN06297358_2136 | Not Available | Positive | 2489264 - 2490580 | 48742.5 |
| uncharacterized membrane protein | SAMN06297358_2137 | Not Available | Positive | 2490642 - 2491091 | 16608.5 |
| hypothetical protein | SAMN06297358_2138 | Not Available | Positive | 2491162 - 2491503 | 12756.4 |
| dknyy family protein | SAMN06297358_2139 | Not Available | Negative | 2491736 - 2492491 | 29516.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

