Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| res domain-containing protein | SAMN06297358_2119 | Not Available | Positive | 2468979 - 2470001 | 38724.2 |
| hipa n-terminal domain-containing protein | SAMN06297358_2121 | Not Available | Negative | 2470838 - 2471230 | 15389.8 |
| hypothetical protein | SAMN06297358_2122 | Not Available | Negative | 2471368 - 2472246 | 33764.3 |
| putative restriction endonuclease | SAMN06297358_2123 | Not Available | Negative | 2472281 - 2473237 | 36502.0 |
| hypothetical protein | SAMN06297358_2124 | Not Available | Negative | 2473831 - 2475306 | 54338.4 |
| hypothetical protein | SAMN06297358_2125 | Not Available | Positive | 2475911 - 2477416 | 56323.1 |
| hypothetical protein | SAMN06297358_2126 | Not Available | Negative | 2477700 - 2478119 | 15191.9 |
| hypothetical protein | SAMN06297358_2127 | Not Available | Negative | 2478389 - 2478697 | 11464.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN06297358_2128 | Not Available | Negative | 2479063 - 2480589 | 57935.7 |
| histidine kinase | SAMN06297358_2129 | Not Available | Positive | 2480746 - 2481810 | 39673.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

