Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyladenine dna glycosylase alkd | SAMN06297358_2089 | Not Available | Negative | 2439373 - 2440071 | 27056.0 |
| hypothetical protein | SAMN06297358_2090 | Not Available | Negative | 2440199 - 2440708 | 18779.2 |
| mechanosensitive ion channel | SAMN06297358_2091 | Not Available | Positive | 2440985 - 2442784 | 67762.0 |
| hypothetical protein | SAMN06297358_2092 | Not Available | Negative | 2443308 - 2443787 | 18131.0 |
| hypothetical protein | SAMN06297358_2093 | Not Available | Negative | 2443784 - 2444269 | 17878.3 |
| hypothetical protein | SAMN06297358_2094 | Not Available | Negative | 2444311 - 2444682 | 14154.4 |
| hypothetical protein | SAMN06297358_2095 | Not Available | Negative | 2444965 - 2445603 | 22593.0 |
| hypothetical protein | SAMN06297358_2096 | Not Available | Negative | 2445802 - 2446032 | 8336.08 |
| lyttr dna-binding domain-containing protein | SAMN06297358_2097 | Not Available | Negative | 2446441 - 2447268 | 32409.0 |
| hypothetical protein | SAMN06297358_2098 | Not Available | Positive | 2447593 - 2447967 | 14261.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

