Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat-containing protein | SAMN06297358_2079 | Not Available | Negative | 2433050 - 2433982 | 35773.5 |
| hypothetical protein | SAMN06297358_2080 | Not Available | Negative | 2433988 - 2434167 | 6638.92 |
| elaa protein | SAMN06297358_2081 | Not Available | Positive | 2434358 - 2434804 | 16737.3 |
| response regulator receiver domain-containing protein | SAMN06297358_2082 | Not Available | Negative | 2434824 - 2435213 | 14650.9 |
| dinb superfamily protein | SAMN06297358_2083 | Not Available | Negative | 2435460 - 2435903 | 17026.4 |
| hypothetical protein | SAMN06297358_2084 | Not Available | Negative | 2435927 - 2436520 | 22749.3 |
| grpb domain, predicted nucleotidyltransferase, upf0157 family | SAMN06297358_2085 | Not Available | Negative | 2436650 - 2437192 | 20719.7 |
| hypothetical protein | SAMN06297358_2086 | Not Available | Negative | 2437247 - 2437543 | 11164.3 |
| hypothetical protein | SAMN06297358_2087 | Not Available | Negative | 2437575 - 2438270 | 26581.5 |
| hypothetical protein | SAMN06297358_2088 | Not Available | Negative | 2438309 - 2439316 | 38314.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

