Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 2421764 - 2421840 | Not Available |
| lipid-a-disaccharide synthase | SAMN06297358_2070 | Not Available | Negative | 2422043 - 2423146 | 41402.7 |
| hypothetical protein | SAMN06297358_2071 | Not Available | Negative | 2423241 - 2423522 | 10445.2 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN06297358_2072 | Not Available | Negative | 2423523 - 2424341 | 29660.3 |
| predicted zn-dependent peptidase | SAMN06297358_2073 | Not Available | Positive | 2424542 - 2427478 | 110570.0 |
| 8-oxo-dgtp diphosphatase | SAMN06297358_2074 | Not Available | Negative | 2427906 - 2428595 | 26550.4 |
| 6-phosphofructokinase | SAMN06297358_2075 | Not Available | Positive | 2428718 - 2429707 | 35223.6 |
| hypothetical protein | SAMN06297358_2076 | Not Available | Positive | 2429721 - 2430563 | 31637.8 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN06297358_2077 | Not Available | Positive | 2430636 - 2431691 | 37748.2 |
| hypothetical protein | SAMN06297358_2078 | Not Available | Negative | 2432767 - 2433096 | 12293.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

