Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-n-acetylglucosaminidase | SAMN06297358_2059 | Not Available | Negative | 2405046 - 2407283 | 86837.6 |
| glucose/galactose transporter | SAMN06297358_2060 | Not Available | Negative | 2407390 - 2408652 | 44958.5 |
| hypothetical protein | SAMN06297358_2061 | Not Available | Negative | 2408657 - 2410411 | 64793.7 |
| hexosaminidase | SAMN06297358_2062 | Not Available | Negative | 2410427 - 2412292 | 70675.3 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN06297358_2063 | Not Available | Negative | 2412285 - 2413103 | 29678.0 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN06297358_2064 | Not Available | Negative | 2413141 - 2414235 | 40411.0 |
| tachylectin | SAMN06297358_2065 | Not Available | Negative | 2414237 - 2415469 | 44406.2 |
| starch-binding associating with outer membrane | SAMN06297358_2066 | Not Available | Negative | 2415463 - 2417268 | 68622.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2067 | Not Available | Negative | 2417277 - 2420387 | 114499.0 |
| transcriptional regulator, deor family | SAMN06297358_2068 | Not Available | Positive | 2420797 - 2421546 | 27745.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

