Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN06297358_2048 | Not Available | Negative | 2396188 - 2397174 | 37186.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN06297358_2049 | Not Available | Negative | 2397243 - 2397827 | 22579.0 |
| hypothetical protein | SAMN06297358_2050 | Not Available | Positive | 2397886 - 2398011 | 4825.98 |
| di-haem cytochrome c peroxidase | SAMN06297358_2051 | Not Available | Negative | 2398089 - 2398745 | 24516.3 |
| transcriptional regulator, hxlr family | SAMN06297358_2052 | Not Available | Negative | 2399212 - 2399616 | 15041.2 |
| doxx-like family protein | SAMN06297358_2053 | Not Available | Positive | 2399725 - 2400102 | 13534.1 |
| snoal-like domain-containing protein | SAMN06297358_2054 | Not Available | Positive | 2400139 - 2400579 | 16835.9 |
| aldose 1-epimerase | SAMN06297358_2056 | Not Available | Negative | 2401649 - 2402776 | 41877.6 |
| cellulase (glycosyl hydrolase family 5) | SAMN06297358_2057 | Not Available | Negative | 2402821 - 2403906 | 41929.2 |
| beta-xylosidase, gh43 family | SAMN06297358_2058 | Not Available | Negative | 2403914 - 2405086 | 44179.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

