Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily f, member 3 | SAMN06297358_2038 | Not Available | Positive | 2380600 - 2382231 | 61741.0 |
| adenosylhomocysteinase | SAMN06297358_2039 | Not Available | Positive | 2382429 - 2383745 | 48443.1 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN06297358_2040 | Not Available | Positive | 2383992 - 2385047 | 41145.4 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN06297358_2041 | Not Available | Negative | 2385139 - 2385669 | 20693.0 |
| transcriptional regulator, hxlr family | SAMN06297358_2042 | Not Available | Positive | 2385767 - 2386120 | 13533.7 |
| amidohydrolase family protein | SAMN06297358_2043 | Not Available | Negative | 2386133 - 2387374 | 45679.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN06297358_2044 | Not Available | Negative | 2387447 - 2388556 | 40939.1 |
| protein of unknown function | SAMN06297358_2045 | Not Available | Negative | 2388567 - 2391140 | 96465.6 |
| susd family protein | SAMN06297358_2046 | Not Available | Negative | 2391227 - 2392639 | 50974.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN06297358_2047 | Not Available | Negative | 2392651 - 2395992 | 121555.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

