Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | SAMN06297358_0188 | Not Available | Positive | 213981 - 215348 | 49804.2 |
| membrane fusion protein, cu(i)/ag(i) efflux system | SAMN06297358_0189 | Not Available | Positive | 215440 - 216660 | 44621.8 |
| protein of unknown function | SAMN06297358_0190 | Not Available | Positive | 216791 - 217324 | 19073.1 |
| dienelactone hydrolase family protein | SAMN06297358_0191 | Not Available | Negative | 217448 - 218275 | 31576.2 |
| hypothetical protein | SAMN06297358_0192 | Not Available | Positive | 218352 - 218642 | 10934.7 |
| protein of unknown function | SAMN06297358_0193 | Not Available | Positive | 218656 - 219417 | 29970.9 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN06297358_0194 | Not Available | Negative | 219487 - 220455 | 36039.5 |
| hypothetical protein | SAMN06297358_0195 | Not Available | Positive | 220654 - 221154 | 19315.2 |
| phnb protein | SAMN06297358_0196 | Not Available | Positive | 221322 - 221822 | 18228.5 |
| doxx-like family protein | SAMN06297358_0197 | Not Available | Positive | 221803 - 222192 | 14375.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

