Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative bacilliredoxin, yphp/yqiw family | SAMN06297358_2028 | Not Available | Negative | 2371486 - 2371896 | 14815.9 |
| peptidase family m23 | SAMN06297358_2029 | Not Available | Positive | 2372063 - 2372899 | 31302.1 |
| protein ccma, bactofilin family | SAMN06297358_2030 | Not Available | Positive | 2372901 - 2373296 | 14114.2 |
| hypothetical protein | SAMN06297358_2031 | Not Available | Negative | 2373346 - 2373810 | 16657.5 |
| protein of unknown function | SAMN06297358_2032 | Not Available | Negative | 2373816 - 2374166 | 13132.7 |
| two component transcriptional regulator, lyttr family | SAMN06297358_2033 | Not Available | Negative | 2374224 - 2374970 | 28515.6 |
| histidine kinase | SAMN06297358_2034 | Not Available | Negative | 2374982 - 2376904 | 73812.9 |
| fructan beta-fructosidase | SAMN06297358_2035 | Not Available | Negative | 2377045 - 2378679 | 62694.3 |
| protein of unknown function | SAMN06297358_2036 | Not Available | Positive | 2378854 - 2379627 | 27977.2 |
| hypothetical protein | SAMN06297358_2037 | Not Available | Positive | 2379658 - 2380473 | 32551.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

