Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter xixiisoli |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1550273 bp
Thymine Count
1549681 bp
Guanine Count
942263 bp
Cytosine Count
932424 bp
Genome Length
4974702 bp
Protein-coding Genes
4166 genes
Non-Coding Genes
48 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase alpha chain | SAMN06297358_2006 | Not Available | Negative | 2349071 - 2349658 | 21400.4 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN06297358_2007 | Not Available | Negative | 2349832 - 2351319 | 54788.7 |
| protein of unknown function | SAMN06297358_2008 | Not Available | Positive | 2351649 - 2352089 | 16714.0 |
| l-threonine aldolase | SAMN06297358_2009 | Not Available | Negative | 2352305 - 2353333 | 37093.9 |
| badf-type atpase | SAMN06297358_2010 | Not Available | Positive | 2353754 - 2354605 | 31723.5 |
| acyl-coa hydrolase | SAMN06297358_2011 | Not Available | Positive | 2354733 - 2355128 | 14786.2 |
| shikimate kinase | SAMN06297358_2012 | Not Available | Negative | 2355261 - 2355764 | 18877.9 |
| four helix bundle protein | SAMN06297358_2013 | Not Available | Negative | 2355843 - 2356205 | 13903.8 |
| peptide/nickel transport system permease protein | SAMN06297358_2014 | Not Available | Negative | 2356341 - 2357396 | 39126.5 |
| doxx protein | SAMN06297358_2015 | Not Available | Negative | 2357397 - 2358551 | 43349.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

